[Straipsniai] Jasnauskaitė, Monika; Juozapaitis, Jonas; Liegutė, Toma; Grigaitis, Rokas; Skorupskaitė, Aistė; Steinchen, W.; Mikšys, Algirdas; Truncaitė, Lidija; Kazlauskaitė, K.; Torres Jimenez, Maria Fernanda; Khochare, Sharvika Subodh; Dudas, Gytis; Bange, G.; Malinauskaitė, Lina; Songailienė, Inga; Pausch, Patrick. Structure and mechanism of antiphage retron Eco2 // Nature structural & molecular biology. Berlin : Springer Nature Limited. ISSN 1545-9993. eISSN 1545-9985. 2026, vol. 33, iss. 2, p. 330-340. DOI: 10.1038/s41594-026-01754-2.

[Straipsniai] Lucaci, Alexander G.; Shaikh, Hisham; Chong, Li Chong; Tahzima, Rachid; Forgia, Marco; Mansour, Karima; Sakaguchi, Shoichi; Nakagawa, So; Hou, Xin; Demina, Tatiana; Mallika, Fhilmar Raj Jayaraj; Kupczok, Anne; Lytras, Spyros; Debat, Humberto; Charon, Justine; Urzo, Michael; Raco, Milica; Kim, Rachel; Rivero, Ricardo; Karapliafis, Dimitris; Sirkinti, Leyla; Luebbert, Laura; Nishimura, Luca; Chikhi, Rayan; De Coninck, Lander; Charriat, Florian; Soufir, Emma; Gajdov, Vladimir; Krannich, Thomas; Dudas, Gytis; Lood, Cédric; Rodríguez-Ramos, Josue; Pecman, Anja; Neri, Uri; Werner, Almut; Le, Mia; Osundahunsi, Bolaji; Petersen, Nils; Maclot, François; Gutierrez, Serafin; Paraskevopoulou, Sofia; Hillary, Luke; Olendraite, Ingrida. Consensus statement from the second RdRp Summit: towards a unified framework for RNA virus biology // Peer community journal. Nice : Centre Mersenne. eISSN 2804-3871. 2026, vol. 6, art. no. e50, p. 1-16. DOI: 10.24072/pcjournal.727.

[Straipsniai] Smičius, Martynas; Olendraitė, Ingrida; Bačelis, Jonas; Šimaitis, Aistis; Gabrielaitė, Miglė; Oude Munnink, Bas B; Sikkema, Reina S; Stankevičius, Arūnas; Janeliūnas, Žygimantas; Bušauskas, Paulius; Pumputis, Egidijus; Pilevičienė, Simona; Mačiulskis, Petras; Masiulis, Marius; Paulauskas, Vidmantas; Ščeponavičienė, Snieguolė; Katėnaitė, Monika; Norvilas, Rimvydas; Raugienė, Ligita; Jonikas, Rimvydas; Nasvytienė, Inga; Žemeckienė, Živilė; Tamušauskaitė, Kamilė; Norkienė, Milda; Vasiliūnaitė, Emilija; Žiogienė, Danguolė; Timinskas, Albertas; Šukys, Marius; Šarauskas, Mantas; Juozapaitė, Dovilė; Naumovas, Daniel; Pautienius, Arnoldas; Vitkauskienė, Astra; Ugenskienė, Rasa; Gedvilaitė, Alma; Čereškevičius, Darius; Griškevičius, Laimonas; Koopmans, Marion; Malakauskas, Alvydas; Dudas, Gytis. Anthropozoonotic spillovers reveal sustained long-term cryptic circulation of SARS-CoV-2 within and between Lithuanian mink farms // Virus evolution. Oxford : Oxford University Press. eISSN 2057-1577. 2026, vol. 12, iss. 1, p. 1-9. DOI: 10.1093/ve/veag014.

[Straipsniai] Rehman, Zaira; Edington, Katherine; Jamal, Zunera; Kritz-Wilson, Angelika; Dudas, Gytis; Sims, Samuel; Myers, Richard; Afrough, Babak; Inamdar, Leena; Haider, Syed Adnan; Ikram, Aamer; Salman, Muhammad; Umair, Massab. The introduction of the SARS-CoV-2 BA.4 lineage into Pakistan // Archives of virology. Vienna : Springer Nature. ISSN 0304-8608. eISSN 1432-8798. 2025, vol. 170, iss. 2, art. no. 26, p. [1-9]. DOI: 10.1007/s00705-024-06211-3.

[Straipsniai] Peacock, Thomas; Moncla, Louise; Dudas, Gytis; VanInsberghe, David; Sukhova, Ksenia; Lloyd-Smith, James O; Worobey, Michael; Lowen, Anice C; Nelson, Martha I. The global H5N1 influenza panzootic in mammals // Nature. Berlin : Springer Nature. eISSN 1476-4687. 2025, vol. 637, p. 304-313. DOI: 10.1038/s41586-024-08054-z.

[Straipsniai] Baele, Guy; Carvalho, Luiz M; Brusselmans, Marius; Dudas, Gytis; Ji, Xiang; Mccrone, John T; Lemey, Philippe; Suchard, Marc A; Rambaut, Andrew. HIPSTR: highest independent posterior subtree reconstruction in TreeAnnotator X // Bioinformatics. Oxford : Oxford University Press. ISSN 1367-4803. eISSN 1367-4811. 2025, vol. 41, iss. 10, p. [1-7]. DOI: 10.1093/bioinformatics/btaf488.

[Straipsniai] Bollen, Nena; Hong, Samuel L.; Potter, Barney I.; Lienhard, Reto; Tritten, Marie-Lise; Sierro, Nicolas; Guedj, Emmanuel; Dulize, Rémi; Bornand, David; Auberson, Mehdi; Berthouzoz, Maxime; Duvoisin, Pauline; Ivanov, Nikolai V.; Peitsch, Manuel C.; Hill, Verity; Matheeussen, Veerle; Bontems, Sébastien; Verhasselt, Bruno; Degosserie, Jonathan; Waumans, Luc; Bayon-Vicente, Guillaume; Reynders, Marijke; Cattoir, Lien; Coste, Valentin; Valgaeren, Hanne; Van Weyenbergh, Johan; Cuypers, Lize; André, Emmanuel; Durkin, Keith; Maes, Piet; Khan, Kamran; Huber, Carmen; Suchard, Marc A.; Foudi, Martin Maidadi; Godwe, Célestin; Yifomnjou, Moise Henri Moumbeket; Landry, Messanga; Njouom, Richard; Kingebeni, Placide Mbala; Oluniyi, Paul; Olawoye, Idowu B.; Happi, Christian; Ayouba, Ahidjo; Peeters, Martine; Behillil, Sylvie; Simon-Lorière, Etienne; Hölzer, Martin; Dellicour, Simon; Dudas, Gytis; Baele, Guy. Tracking down the origin and subsequent spread of SARS-CoV-2 lineage B.1.619 // Virus evolution. Oxford : Oxford University Press. eISSN 2057-1577. 2025, vol. 11, iss. 1, p. 1-14. DOI: 10.1093/ve/veaf017.

[Straipsniai] Brusselmans, Marius; Carvalho, Luiz Max; L. Hong, Samuel; Gao, Jiansi; Matsen, Frederick A.; Rambaut, Andrew; Lemey, Philippe; Suchard, Marc A.; Dudas, Gytis; Baele, Guy. On the importance of assessing topological convergence in Bayesian phylogenetic inference // Virus evolution. Oxford : Oxford University Press. eISSN 2057-1577. 2024, vol. 10, iss. 1, art. no. veae081, p. [1-13]. DOI: 10.1093/ve/veae081.

[Straipsniai] Holtz, Andrew; Van Weyenbergh, Johan; Hong, Samuel L.; Cuypers, Lize; O'Toole, Aine; Dudas, Gytis; Gerdol, Marco; Potter, Barney I.; Ntoumi, Francine; Mapanguy, Claujens Chastel Mfoutou; Vanmechelen, Bert; Wawina-Bokalanga, Tony; Van Holm, Bram; Menezes, Soraya Maria; Soubotko, Katja; Van Pottelbergh, Gijs; Wollants, Elke; Vermeersch, Pieter; Jacob, Ann-Sophie; Maes, Brigitte; Obbels, Dagmar; Matheeussen, Veerle; Martens, Geert; Gras, Jeremie; Verhasselt, Bruno; Laffut, Wim; Vael, Carl; Goegebuer, Truus; van der Kant, Rob; Rousseau, Frederic; Schymkowitz, Joost; Serrano, Luis; Delgado, Javier; Wenseleers, Tom; Bours, Vincent; Andre, Emmanuel; Suchard, Marc A.; Rambaut, Andrew; Dellicour, Simon; Maes, Piet; Durkin, Keith; Baele, Guy. Emergence of the B.1.214.2 SARS-CoV-2 lineage with an Omicron-like spike insertion and a unique upper airway immune signature // BMC infectious diseases. London : BMC. eISSN 1471-2334. 2024, vol. 24, iss. 1, art. no. 1139, p. [1-18]. DOI: 10.1186/s12879-024-09967-w.

[Straipsniai] Glascock, Abigail; Waltari, Eric; Dudas, Gytis; Wong, Joan; Ahyong, Vida. PoMeLo: a systematic computational approach to predicting metabolic loss in pathogen genomes // BMC Bioinformatics. London : BioMed Central Ltd. eISSN 1471-2105. 2024, vol. 25, iss. 1, art. no. 49, p. [1-13]. DOI: 10.1186/s12859-024-05640-w.

Apdulkintojų–virusų bendrijų įvairovė ir struktūra metatranskriptomuose

Finansuotojas: Švedijos mokslinių tyrimų taryba

Europos Komisijos Twinning projektas Sakartvele

Finansuotojas: Europos Komisija

Metagenomiškai atrastų ortomiksovirusų paviršiaus baltymų apibūdinimas

Finansuotojas: Europos molekulinės biologijos organizacija

Lietuvos SARS-CoV-2 pandemijos genominės stebėsenos projektas

Finansuotojas: LR Sveikatos apsaugos ministerija

SciPy John Hunter meistriškumo braižyboje prizas, 1-oji vieta

SciPy

Mahan podoktorantūros stipendija

Fred Hutchinson vėžio tyrimų centras

SMBE jaunojo tyrėjo kelionės apdovanojimas

SMBE

Wellcome Trust kelionės stipendija

Wellcome Trust

Ashworth prizas ir klasės medalis

Edinburgo Universiteto Biologijos Mokslų Mokykla

The COINS 2025: international conference of life sciences

Pranešimas: Exploring the cell entry potential of Wuhan mosquito virus 6 glycoprotein

Rapid global population dynamics and fast surface protein evolution imply a vertebrate host for a prevalent mosquito orthomyxovirus

Pranešimas: Oral presentation at the Virus Genomics, Evolution and Bioinformatics conference, “Rapidglobalpopulationdynamicsandfastsurfaceproteinevolutionimplyavertebrate host for a prevalent mosquito orthomyxovirus”

Keynote presentation at the kick-off meeting for the European Commission Twinning project “Enhance National Disease Surveillance System in Georgia through Improvement of the Epidemiological and Molecular (Genomic) Surveillance”, GE 21 NDICI HE 01 23

Pranešimas: Keynote presentation at the kick-off meeting for the European Commission Twinning project “Enhance National Disease Surveillance System in Georgia through Improvement of the Epidemiological and Molecular (Genomic) Surveillance”, GE 21 NDICI HE 01 23

Reticulate evolution, temporal resolution and custom data visualisations for BEAST analyses

Pranešimas: Invited oral presentation at the Phylogenomics Workshop “Reticulate evolution, temporal resolution and custom data visualisations for BEAST analyses” at the 2024 Workshop on Phylogenomics

Open readings 2023: 66th international conference for students of physics and natural sciences, April 18-21, 2023, Vilnius, Lithuania: annual abstract book

Pranešimas: The modern response to infectious disease outbreaks using genetic sequencing

Basically flu but in mosquitoes: Wuhan mosquito virus 6 as a promising new study system

Pranešimas: Invited oral presentation at Virus Club “Basically flu but in mosquitoes: Wuhan mosquito virus 6 as a promising new study system”

Towards Genomic Epidemiology of Arthropod Viruses

Pranešimas: Invited oral presentation at the EMBO Microbial Evolution meeting “Towards Genomic Epidemiology of Arthropod Viruses”

Inaugural Association of Public Health Laboratories (APHL), Chan Zuckerberg Biohub Network, Centers for Disease Control and Prevention (CDC) Southeast Asia In-Person Pathogen Genomic Epidemiology Training

Pranešimas: Invited oral presentation at “Inaugural Association of Public Health Laboratories (APHL), Chan Zuckerberg Biohub Network, Centers for Disease Control and Prevention (CDC) Southeast Asia In-Person Pathogen Genomic Epidemiology Training”

The RNA virus research revolution slumbering in accumulated metagenomic data

Pranešimas: Invited oral presentation at Fred Hutchinson Cancer Center computational biology seminar, “The RNA virus research revolution slumbering in accumulated metagenomic data”

Small victories of the Lithuanian SARS-CoV-2 genomic surveillance programme

Pranešimas: Invited oral presentation at Lithuanian Biochemical Society’s conference Biochemistry in the Big Data Age, “Small victories of the Lithuanian SARS-CoV-2 genomic surveillance programme”